What Vials are Compatible with Agilent Technologies LC Autosamplers

Quick Answer

Most Agilent LC and UHPLC autosamplers are designed to use the standard 12 × 32 mm autosampler vial with a 9 mm screw thread and PTFE/silicone slit septa. These vials match the tray geometry and injection mechanics used in most Agilent systems, providing consistent injection depth, reliable needle alignment, and reproducible analytical results.

Agilent LC Vial Compatibility

Laboratories running autosamplers from Agilent often ask which vials are compatible with Agilent LC autosamplers. Selecting the correct vial is important for consistent injection accuracy, reliable needle alignment, and protecting analytical results.

At Chrom Tech, we work directly with chromatography laboratories supporting Agilent LC and UHPLC systems and regularly help determine the correct vial configuration for reliable results.

In most cases, 12 × 32 mm autosampler vials with a 9 mm screw thread and PTFE/silicone slit septa are recommended because they match the tray design and injection mechanics used on most Agilent autosamplers.

Chrom Tech has supported chromatography laboratories since 1983, specializing in autosampler vials, closures, and chromatography consumables used across LC, GC, and autosampler workflows.

Instrument Compatibility Matrix — Agilent Click ✓ to jump to recommended SKUs
Manufacturer Model / Autosampler Crimp 11mm Narrow Crimp 11mm Wide Snap 11mm Wide Screw 8-425 Screw 9mm HS 20mm 10 mL HS 20mm 20 mL HS 18mm Thrd 10 (Mag) HS 18mm Thrd 20 (Mag)
Agilent 1090, 1100, 1200
Agilent 1260, 1290 Infinity
Vial Formats & Recommended In-Stock SKUs Click ✓ in compatibility tables to jump here

Each column is a vial family. The compatibility matrix highlights the matching column so customers can quickly identify the recommended SKUs.

Vial Family Crimp 11mm Narrow Crimp 11mm Wide Snap 11mm Wide Screw 8-425 Screw 9mm HS 20mm 10 mL HS 20mm 20 mL HS 18mm Thrd 10 (Mag) HS 18mm Thrd 20 (Mag)
Vial Dimension (mm) 12×32 12×32 12×32 12×32 12×32 23×46 23×75 23×46 23×75
Volume (mL) 2 2 2 2 2 10 20 10 20
Neck Finish 11mm 11mm 11mm 8-425 9mm 20mm 20mm 18mm Thread 18mm Thread
Comment Narrow Mouth Wide Mouth Wide Mouth Narrow Mouth Wide Mouth Magnetic Magnetic
Clear Vial CTV-1100M CTV-1104 CTV-1108 408213 CTV-1209 CTV-2246 CTV-2375 CTV-2346T CTV-2375T
Clear Vial w/MS CTV-1100GS CTV-1104GS CTV-1108GS CTV-1208GS CTV-1209GS
Amber Vial CTV-1100A CTV-1104A CTV-1108A 404810 CTV-1209A CTV-2375A CTV-2346AT CTV-2375AT
Amber Vial w/MS CTV-1100GSA CTV-1104GSA CTV-1108GSA CTV-1208MSA CTV-1209GSA
Low Volume Flat Bottom Insert 1062 405342 405342 1062 405342
Low Volume Tapered Bottom Insert 200238 CTI-9525 CTI-9525 200238 CTI-9525
Closure (PTFE/Silicone Septa with closure) CTC-1109 CTC-1109 CTC-1305 CTC-1254 CTC-0952 408077 408077 CTC-1852M CTC-1852M
Closure (PTFE/Silicone Septa with slit with closure) CTC-1109B-SLIT CTC-1109B-SLIT CTC-1370 CTC-0955

Common Agilent Autosamplers and Vial Compatibility

Most Agilent LC autosamplers are designed to use standard 12 × 32 mm autosampler vials, including systems such as:

  • Agilent 1100 Series HPLC System
  • Agilent 1200 Series HPLC System
  • Agilent 1260 Infinity LC System
  • Agilent 1290 Infinity II LC System

These autosamplers are optimized for vial dimensions that ensure:

  • Proper needle entry
  • Consistent injection depth
  • Reliable tray indexing
  • Reduced risk of missed injections

Recommended Vial Specifications

For most Agilent autosamplers, the following vial configuration provides the best compatibility and performance.

Vial Format

  • 12 × 32 mm autosampler vial

Capacity

  • 1.5 mL or 2.0 mL
  • Limited-volume inserts or fused inserts can be used for small sample quantities
  • Helps ensure the autosampler needle consistently reaches the sample while minimizing sample loss

Neck Finish

  • 9 mm screw thread
  • 11 mm snap top vials
  • 11 mm crimp top vials

Material

  • Type I borosilicate glass
  • Polypropylene

Closure

  • PTFE/silicone septa with slit

This configuration is widely used across LC laboratories because it balances instrument compatibility, sealing performance, and ease of use during high-throughput workflows. At Chrom Tech, we recommend slit septa for Agilent HPLC systems to help prevent autosampler errors and minimize downtime.


Agilent Autosampler Considerations

Based on Chrom Tech’s experience supporting Agilent LC systems, several factors can influence autosampler vial performance.

1. Septa Quality Matters

Autosamplers performing high injection counts benefit from septa that resist coring and maintain a proper seal. Pre-slit septa improve injection reliability and help reduce autosampler errors.

2. Consistent Vial Dimensions Are Important

Variability in vial height or opening diameter can affect needle alignment. High-quality vials with tight dimensional tolerances help maintain reliable injection performance.

3. UHPLC Systems Are More Sensitive

High-performance systems such as the Agilent 1290 Infinity II LC System operate at higher pressures and faster injection speeds. These systems benefit from precision-manufactured vials that maintain consistent geometry and sealing performance.


Quick Compatibility Summary

Most Agilent LC autosamplers are compatible with:

  • 12 × 32 mm autosampler vials
  • 9 mm screw thread vials or 11 mm snap top vials
  • 1.5 mL or 2.0 mL capacity
  • Vials with inserts for small sample volumes

Using these standard configurations ensures proper autosampler operation and reliable chromatographic results.


Need Help Selecting the Right Vial?

Chrom Tech chromatography specialists help laboratories match:

  • Agilent instrument model
  • Sample and injection volume
  • Method requirements

to the correct vial configuration for reliable autosampler performance across Agilent LC and UHPLC systems.

Frequently Asked Questions

What vial size do Agilent LC autosamplers use?

Most Agilent LC autosamplers use standard 12 × 32 mm autosampler vials with 1.5 mL or 2.0 mL capacity.

Why are 9 mm screw thread vials commonly used with Agilent LC systems?

9 mm screw thread vials match the tray design and injection mechanics used by most Agilent autosamplers, ensuring consistent needle alignment and reliable sealing.

When should vial inserts be used in LC autosamplers?

Vial inserts are recommended when working with small sample volumes. Inserts help concentrate the sample at the bottom of the vial so the autosampler needle can consistently reach it during injection.