What Vials are Compatible with Thermo LC Autosamplers

Quick Answer

Most Thermo Scientific LC and UHPLC autosamplers use the standard 12 × 32 mm autosampler vial with a 9 mm screw thread and PTFE/silicone slit septa. These vials match the tray geometry and injection mechanics used by most Thermo LC systems, ensuring accurate needle positioning, reliable injection volumes, and consistent analytical results.

Vial Hero

Laboratories running autosamplers from Thermo often ask which vials are compatible with Thermo LC autosamplers. Selecting the correct vial is important for consistent injection accuracy, reliable needle positioning, and maintaining sample integrity during analysis.

At Chrom Tech, we work directly with chromatography laboratories supporting Thermo LC and UHPLC systems and regularly help determine the correct vial configuration for reliable results.

In most cases, 12 × 32 mm autosampler vials with a 9 mm screw thread are recommended because they match the tray design and injection mechanics used on most Thermo LC autosamplers.

Chrom Tech has supported chromatography laboratories since 1983, specializing in autosampler vials, closures, and chromatography consumables used across LC, GC, and autosampler workflows.

Instrument Compatibility Matrix — Other Manufacturers Click ✓ to jump to recommended SKUs
Manufacturer Model / Autosampler Crimp 11mm Narrow Crimp 11mm Wide Snap 11mm Wide Screw 8-425 Screw 9mm HS 20mm 10 mL HS 20mm 20 mL HS 18mm Thrd 10 (Mag) HS 18mm Thrd 20 (Mag)
Thermo Vanquish (VH-A10-A, VF-A10-A, VC-A10-A, VH-A20-A, VF-A20-A, VH-A30-A, VF-A30-A, VN-A10-A)
Thermo WPS-3000RS / TRS / TXRS / TBRS / SL / TBSL / PL / FC
Thermo AS-AP, AS-HV, AS-50, AS-40
Thermo TriPlus RSH SMART
Thermo TriPlus RSH
Thermo TriPlus 500 HS
Thermo TriPlus 100 LS
Vial Formats & Recommended In-Stock SKUs Click ✓ in compatibility tables to jump here

Each column is a vial family. The compatibility matrix highlights the matching column so customers can quickly identify the recommended SKUs.

Vial Family Crimp 11mm Narrow Crimp 11mm Wide Snap 11mm Wide Screw 8-425 Screw 9mm HS 20mm 10 mL HS 20mm 20 mL HS 18mm Thrd 10 (Mag) HS 18mm Thrd 20 (Mag)
Vial Dimension (mm) 12×32 12×32 12×32 12×32 12×32 23×46 23×75 23×46 23×75
Volume (mL) 2 2 2 2 2 10 20 10 20
Neck Finish 11mm 11mm 11mm 8-425 9mm 20mm 20mm 18mm Thread 18mm Thread
Comment Narrow Mouth Wide Mouth Wide Mouth Narrow Mouth Wide Mouth Magnetic Magnetic
Clear Vial CTV-1100M CTV-1104 CTV-1108 408213 CTV-1209 CTV-2246 CTV-2375 CTV-2346T CTV-2375T
Clear Vial w/MS CTV-1100GS CTV-1104GS CTV-1108GS CTV-1208GS CTV-1209GS
Amber Vial CTV-1100A CTV-1104A CTV-1108A 404810 CTV-1209A CTV-2375A CTV-2346AT CTV-2375AT
Amber Vial w/MS CTV-1100GSA CTV-1104GSA CTV-1108GSA CTV-1208MSA CTV-1209GSA
Low Volume Flat Bottom Insert 1062 405342 405342 1062 405342
Low Volume Tapered Bottom Insert 200238 CTI-9525 CTI-9525 200238 CTI-9525
Closure (PTFE/Silicone Septa with closure) CTC-1109 CTC-1109 CTC-1305 CTC-1254 CTC-0952 408077 408077 CTC-1852M CTC-1852M
Closure (PTFE/Silicone Septa with slit with closure) CTC-1109B-SLIT CTC-1109B-SLIT CTC-1370 CTC-0955

Common Thermo LC Autosamplers and Vial Compatibility

Most Thermo LC autosamplers are designed around the standard 12 × 32 mm autosampler vial format, including systems such as:

  • Thermo Scientific UltiMate 3000 LC System
  • Thermo Scientific Vanquish UHPLC System

These autosamplers rely on consistent vial dimensions to ensure:

  • Accurate needle entry
  • Reliable injection volumes
  • Smooth tray movement
  • Reduced risk of missed injections

Recommended Vial Specifications

For most Thermo LC autosamplers, the following vial configuration is commonly used.

Vial Format

  • 12 × 32 mm autosampler vial

Capacity

  • 1.5 mL or 2.0 mL
  • Limited-volume inserts or fused inserts can be used when working with small sample quantities
  • This ensures the autosampler needle consistently reaches the sample while minimizing sample loss

Neck Finish

  • 9 mm screw thread
  • 11 mm snap top vials
  • 11 mm crimp top vials

Material

  • Type I borosilicate glass
  • Polypropylene

Closure

  • PTFE/silicone septa with slit

This configuration supports both routine LC workflows and high-throughput UHPLC applications.


Differences Between UltiMate and Vanquish Autosamplers

While vial size compatibility is largely consistent across Thermo LC systems, there are some practical considerations when selecting autosampler consumables.

UltiMate 3000 Systems

  • Widely used across pharmaceutical, environmental, and academic laboratories
  • Compatible with standard autosampler vial formats
  • Typically tolerant of common vial configurations

Vanquish UHPLC Systems

  • Designed for higher performance and faster cycle times
  • Benefit from high-quality vials with tight dimensional tolerances
  • Septa durability becomes more important during high injection counts

Practical Vial Selection Guidance

From laboratories using Thermo LC systems, several best practices consistently improve autosampler performance:

  • Choose vials with consistent manufacturing tolerances
  • Use high-quality septa to minimize coring
  • Select inserts carefully when working with low sample volumes
  • Avoid inconsistent vial heights that can affect needle positioning

These factors can significantly impact injection precision and chromatographic reproducibility.


Quick Compatibility Summary

Most Thermo LC autosamplers are compatible with:

  • 12 × 32 mm autosampler vials
  • 9 mm screw thread vials or 11 mm snap top vials
  • 1.5 mL or 2.0 mL capacity
  • Vials with inserts for low-volume applications

Using these standard vial configurations ensures proper autosampler function and reliable analytical performance.


Need Help Selecting the Right Vial?

Chrom Tech chromatography specialists help laboratories match:

  • Thermo autosampler model
  • Sample and injection volume
  • Analytical method requirements

to the correct vial configuration for reliable autosampler performance across Thermo LC and UHPLC systems.

Frequently Asked Questions

What vial size do Thermo LC autosamplers use?

Most Thermo LC autosamplers use standard 12 × 32 mm autosampler vials with 1.5 mL or 2.0 mL capacity.

Are 9 mm screw thread vials recommended for Thermo LC systems?

Yes. 9 mm screw thread vials are commonly recommended because they match the tray geometry and injection mechanics used by most Thermo LC autosamplers.

When should vial inserts be used in Thermo LC autosamplers?

Vial inserts are useful when working with small sample volumes. They help ensure the autosampler needle reaches the sample consistently while minimizing sample loss.